SNP Profiles of POUND 18 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
1._POUND_18	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
2._GC-08-064-1-86	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
3._GC-08-064-1-86	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
4._GC-08-064-1-86	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
5._POUND_18	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
6._POUND_18	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
7._POUND_18	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
8._POUND_18	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
9._POUND_18	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
10._POUND_18	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
11._POUND_18	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
12._GC-08-064-1-86	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
13._GC-08-064-1-86	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
14._GC-08-064-1-86	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
15._GC-08-064-1-86	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
16._GC-08-064-1-86	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
17._GC-08-064-1-86	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
18._POUND_18	CC	AA	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
19._RUQ_874	_	_	CG	_	_	_	_	GT	_	CC	_	GG	_	AA
20._RUQ_874	_	AA	CG	TT	_	_	_	GT	_	_	_	_	CC	AA
21._RUQ_874	CC	AG	CG	TT	CT	CC	TT	GT	CC	CC	AA	GG	CC	AA
22._GC-08-64-1-86	GG	AA	CG	AA	AG	CC	AA	AC	_	_	AA	GG	GG	AA
23._RUQ_874	GG	AA	CG	AA	AG	CC	AA	AC	_	_	AA	GG	GG	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
1._POUND_18	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
2._GC-08-064-1-86	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
3._GC-08-064-1-86	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
4._GC-08-064-1-86	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
5._POUND_18	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
6._POUND_18	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
7._POUND_18	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
8._POUND_18	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
9._POUND_18	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
10._POUND_18	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
11._POUND_18	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
12._GC-08-064-1-86	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
13._GC-08-064-1-86	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
14._GC-08-064-1-86	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
15._GC-08-064-1-86	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
16._GC-08-064-1-86	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
17._GC-08-064-1-86	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
18._POUND_18	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
19._RUQ_874	_	_	_	_	_	CC	GG	AA	_	AC	GG	_	_	AC
20._RUQ_874	_	_	_	_	TT	CC	GG	_	CC	AC	GG	GT	CT	AC
21._RUQ_874	TT	AA	GG	CC	CT	CC	GG	AA	CC	AC	GG	GT	CT	AC
22._GC-08-64-1-86	AA	AA	GG	GG	AG	GG	CC	_	GG	AC	GG	AC	_	AC
23._RUQ_874	AA	AA	GG	GG	AG	GG	CC	_	GG	AC	GG	AC	_	AC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
1._POUND_18	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
2._GC-08-064-1-86	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
3._GC-08-064-1-86	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
4._GC-08-064-1-86	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
5._POUND_18	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
6._POUND_18	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
7._POUND_18	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
8._POUND_18	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
9._POUND_18	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
10._POUND_18	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
11._POUND_18	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
12._GC-08-064-1-86	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
13._GC-08-064-1-86	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
14._GC-08-064-1-86	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
15._GC-08-064-1-86	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
16._GC-08-064-1-86	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
17._GC-08-064-1-86	AA	GG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
18._POUND_18	AA	GG	AA	CT	AA	_	CC	CT	GT	AC	TT	GG	X_X	X_X
19._RUQ_874	_	_	_	_	AA	_	_	_	_	AC	_	_	X_X	X_X
20._RUQ_874	AA	_	AA	CT	AA	CG	CC	CT	GT	AC	_	_	X_X	X_X
21._RUQ_874	AA	AG	AA	CT	AA	CG	CC	CT	GT	AC	TT	GG	X_X	X_X
22._GC-08-64-1-86	_	GG	AA	AG	AA	CG	CC	AG	AC	AC	TT	GG	X_X	X_X
23._RUQ_874	_	GG	AA	AG	AA	CG	CC	AG	AC	AC	TT	GG	X_X	X_X

Input profile: POUND_18

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Mars Center for Cocoa Science, Brazil

Location: 8186 2 > FP

Dapeng Zhang, 2016

1._POUND_18

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 4

Dapeng Zhang, 2016

2._POUND_18 GC-08-064-1-86

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

3._POUND_18 GC-08-064-1-86

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

4._POUND_18 GC-08-064-1-86

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

5._POUND_18

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 12

Dapeng Zhang, 2016

6._POUND_18

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 11

Dapeng Zhang, 2016

7._POUND_18

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 9

Dapeng Zhang, 2016

8._POUND_18

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 7

Dapeng Zhang, 2016

9._POUND_18

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 6

Dapeng Zhang, 2016

10._POUND_18

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 3

Dapeng Zhang, 2016

11._POUND_18

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 1

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

12._POUND_18 GC-08-064-1-86

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

13._POUND_18 GC-08-064-1-86

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

14._POUND_18 GC-08-064-1-86

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

15._POUND_18 GC-08-064-1-86

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

16._POUND_18 GC-08-064-1-86

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 11

Notes: 11

17._POUND_18 GC-08-064-1-86

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

18._POUND_18

identical
39 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B F447 T2

Dapeng Zhang, 2016

19._POUND_18 RUQ_874

identical
13 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

20._POUND_18 RUQ_874

97.9 %
24 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

21._POUND_18 RUQ_874

97.5 %
40 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

22._POUND_18 GC-08-64-1-86

54.3 %
35 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 8, Block: 1, Rep: 86, Tree: 1

Notes: MCCS_Structure_refs_above_0.9membership

23._POUND_18 RUQ_874

54.3 %
35 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25